[←][→] ath   AT3G19130 Gene
functional annotation
Function   RNA-binding protein 47B  
GO BP
GO:0034063 [list] [network] stress granule assembly  (7 genes)  IEP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (20 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM ISS  
GO MF
GO:0008143 [list] [network] poly(A) binding  (19 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA IDA  
KEGG
Protein NP_188544.1 
BLAST NP_188544.1 
Orthologous [Ortholog page] LOC543919 (sly)  RBP47C (ath)  RBP47C' (ath)  RBP47A (ath)  LOC4329718 (osa)  LOC4347299 (osa)  LOC7457520 (ppo)  LOC11432878 (mtr)  LOC11446957 (mtr)  LOC25482078 (mtr)  LOC100193409 (zma)  LOC100257353 (vvi)  LOC100258930 (vvi)  LOC100278143 (zma)  LOC100284282 (zma)  LOC100777830 (gma)  LOC100785454 (gma)  LOC100798089 (gma)  LOC100801446 (gma)  LOC100814564 (gma)  LOC100819523 (gma)  LOC101247965 (sly)  LOC101261707 (sly)  LOC103653663 (zma)  LOC103832915 (bra)  LOC103837516 (bra)  LOC103839291 (bra)  LOC103859796 (bra)  LOC103868789 (bra)  LOC103869491 (bra)  LOC103871384 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_188544.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188544.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with RBP47B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 CPK1 calcium dependent protein kinase 1 [detail] 830366
5.4 ERO2 endoplasmic reticulum oxidoreductins 2 [detail] 818481
5.3 RAD23B Rad23 UV excision repair protein family [detail] 844304
Coexpressed
gene list		 [Coexpressed gene list for RBP47B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257037_at
257037_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257037_at
257037_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257037_at
257037_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821447      
Refseq ID (protein) NP_188544.1 


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