[←][→] ath   AT3G19770 Gene
functional annotation
Function   Vacuolar sorting protein 9 (VPS9) domain-containing protein  
GO BP
GO:0000919 [list] [network] cell plate assembly  (14 genes)  IMP  
GO:0045324 [list] [network] late endosome to vacuole transport  (27 genes)  IGI  
GO:0048528 [list] [network] post-embryonic root development  (128 genes)  IMP  
GO:0042546 [list] [network] cell wall biogenesis  (231 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  IDA  
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001030728.1  NP_566645.1 
BLAST NP_001030728.1  NP_566645.1 
Orthologous [Ortholog page] VPS9B (ath)  LOC4332330 (osa)  LOC7469119 (ppo)  LOC11418024 (mtr)  LOC100252293 (vvi)  LOC100273143 (zma)  LOC100792686 (gma)  LOC100810958 (gma)  LOC101253937 (sly)  LOC103847200 (bra)  LOC103869423 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001030728.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_566645.1)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for NP_001030728.1)
other 8  (predict for NP_566645.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VPS9A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT1G21200 sequence-specific DNA binding transcription factor [detail] 838715
5.7 AT3G15920 Phox (PX) domain-containing protein [detail] 820835
5.7 AT1G10720 BSD domain-containing protein [detail] 837615
Coexpressed
gene list		 [Coexpressed gene list for VPS9A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257989_at
257989_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257989_at
257989_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257989_at
257989_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821514      
Refseq ID (protein) NP_001030728.1 
NP_566645.1 


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