[←][→] ath   AT3G19800 Gene
functional annotation
Function   E3 ubiquitin-protein ligase, putative (DUF177)  
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (378 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001118666.1  NP_566648.1 
BLAST NP_001118666.1  NP_566648.1 
Orthologous [Ortholog page] LOC4336446 (osa)  LOC11439196 (mtr)  LOC100253004 (vvi)  LOC100278189 (zma)  LOC100788798 (gma)  LOC101246579 (sly)  LOC103836959 (bra) 
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001118666.1)
chlo 6,  chlo_mito 4,  nucl 2  (predict for NP_566648.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_001118666.1)
chlo 6,  other 3  (predict for NP_566648.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G19800 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G12250 Pentapeptide repeat-containing protein [detail] 837778
7.2 AT2G04790 PTB domain engulfment adapter [detail] 815022
7.2 NdhL inorganic carbon transport protein-like protein [detail] 843413
5.9 COG0212 NagB/RpiA/CoA transferase-like superfamily protein [detail] 844007
5.5 AT3G53470 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [detail] 824515
5.5 SHW1 short hypocotyl in white light1 [detail] 843330
Coexpressed
gene list		 [Coexpressed gene list for AT3G19800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257966_at
257966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257966_at
257966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257966_at
257966_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821517      
Refseq ID (protein) NP_001118666.1 
NP_566648.1 


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