[←][→] ath   AT3G20010 Gene
functional annotation
Function   SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein  
GO BP
GO:0080188 [list] [network] RNA-directed DNA methylation  (20 genes)  IGI  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319598.1  NP_001327756.1  NP_001327757.1  NP_001327758.1  NP_001327759.1  NP_001327760.1  NP_001327761.1  NP_188635.1 
BLAST NP_001319598.1  NP_001327756.1  NP_001327757.1  NP_001327758.1  NP_001327759.1  NP_001327760.1  NP_001327761.1  NP_188635.1 
Orthologous [Ortholog page] AT3G16600 (ath)  AT1G11100 (ath)  AT1G50410 (ath)  EDA16 (ath)  LOC4326436 (osa)  LOC4337089 (osa)  LOC4344820 (osa)  LOC7485570 (ppo)  LOC11428547 (mtr)  LOC25485683 (mtr)  LOC100216734 (zma)  LOC100256075 (vvi)  LOC100265351 (vvi)  LOC100792901 (gma)  LOC100795142 (gma)  LOC100802436 (gma)  LOC100805307 (gma)  LOC100811598 (gma)  LOC101243943 (sly)  LOC101251257 (sly)  LOC103636595 (zma)  LOC103642087 (zma)  LOC103829491 (bra)  LOC103830370 (bra)  LOC103859836 (bra)  LOC103869369 (bra)  LOC103871349 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001319598.1)
nucl 10  (predict for NP_001327756.1)
nucl 10  (predict for NP_001327757.1)
nucl 10  (predict for NP_001327758.1)
nucl 10  (predict for NP_001327759.1)
nucl 10  (predict for NP_001327760.1)
nucl 10  (predict for NP_001327761.1)
nucl 10  (predict for NP_188635.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001319598.1)
other 7,  chlo 5  (predict for NP_001327756.1)
other 8  (predict for NP_001327757.1)
other 7  (predict for NP_001327758.1)
other 7,  chlo 5  (predict for NP_001327759.1)
other 7,  chlo 5  (predict for NP_001327760.1)
other 7,  chlo 5  (predict for NP_001327761.1)
other 7,  chlo 5  (predict for NP_188635.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G20010 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 NRPD1B nuclear RNA polymerase D1B [detail] 818591
6.1 CPSF160 cleavage and polyadenylation specificity factor 160 [detail] 835240
6.0 AT1G76280 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 843961
5.4 FRS11 FAR1-related sequence 11 [detail] 837563
Coexpressed
gene list		 [Coexpressed gene list for AT3G20010]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256625_at
256625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256625_at
256625_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256625_at
256625_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821539      
Refseq ID (protein) NP_001319598.1 
NP_001327756.1 
NP_001327757.1 
NP_001327758.1 
NP_001327759.1 
NP_001327760.1 
NP_001327761.1 
NP_188635.1 


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