ATTED-II : GeneID search result

[←][→] ath AT3G20420 Gene

functional annotation

Function

RNAse THREE-like protein 2

GO BP

GO:0006364 [list] [network] rRNA processing

(276 genes)

IEA

GO CC

GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA

GO MF

GO:0004525 [list] [network] ribonuclease III activity	(10 genes)	IMP
GO:0003723 [list] [network] RNA binding	(1790 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_566661.1

BLAST

NP_566661.1

Orthologous

[Ortholog page] LOC4338262 (osa) LOC7483612 (ppo) LOC11421270 (mtr) LOC25501225 (mtr) LOC100243580 (vvi) LOC100272891 (zma) LOC100802288 (gma) LOC101267583 (sly) LOC103869324 (bra)

Subcellular
localization
wolf

chlo 4, nucl 3, cyto 2, chlo_mito 2

(predict for NP_566661.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_566661.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with RTL2 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.1	CW9	Disease resistance protein (CC-NBS-LRR class) family	[detail]	842252
4.1	ABCI12	cobalt ion transmembrane transporter	[detail]	821712
3.8	AT1G78550	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	844191

Coexpressed
gene list

[Coexpressed gene list for RTL2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257678_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257678_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257678_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821587
Refseq ID (protein)	NP_566661.1

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