[←][→] ath   AT3G22690 Gene
functional annotation
Function   LOW protein: PPR containing-like protein  
GO BP
GO:0048564 [list] [network] photosystem I assembly  (16 genes)  IDA  
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (19 genes)  IEP  
GO:0010207 [list] [network] photosystem II assembly  (25 genes)  IDA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IMP  
GO:0009451 [list] [network] RNA modification  (403 genes)  IMP  
GO:0009409 [list] [network] response to cold  (411 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001189950.1  NP_001326902.1  NP_188908.2 
BLAST NP_001189950.1  NP_001326902.1  NP_188908.2 
Orthologous [Ortholog page] LOC7474183 (ppo)  LOC11441453 (mtr)  LOC100266544 (vvi)  LOC100805041 (gma)  LOC100808875 (gma)  LOC101252818 (sly)  LOC103869017 (bra) 
Subcellular
localization
wolf
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001189950.1)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001326902.1)
chlo 6,  nucl 1,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_188908.2)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001189950.1)
chlo 6  (predict for NP_001326902.1)
chlo 6  (predict for NP_188908.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G22690 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 AT1G32415 pentatricopeptide (PPR) repeat-containing protein [detail] 840135
9.7 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830107
9.6 AT2G01510 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 814680
Coexpressed
gene list		 [Coexpressed gene list for AT3G22690]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258346_at
258346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258346_at
258346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258346_at
258346_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821840      
Refseq ID (protein) NP_001189950.1 
NP_001326902.1 
NP_188908.2 


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