[←][→] ath   AT3G22900 Gene
functional annotation
Function   RNA polymerase Rpb7-like, N-terminal domain-containing protein  
GO BP
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IEA  
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (15 genes)  IDA IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA  
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
KEGG
Protein NP_001326806.1  NP_566719.1 
BLAST NP_001326806.1  NP_566719.1 
Orthologous [Ortholog page] NRPE7 (ath)  LOC4337866 (osa)  LOC7498035 (ppo)  LOC25484144 (mtr)  LOC25485783 (mtr)  LOC100261398 (vvi)  LOC100284005 (zma)  LOC100527862 (gma)  LOC101244318 (sly)  LOC101250997 (sly)  LOC101264710 (sly)  LOC103833463 (bra)  LOC103834253 (bra)  LOC107278405 (osa) 
Subcellular
localization
wolf
cyto 8,  chlo 1,  nucl 1,  E.R. 1  (predict for NP_001326806.1)
cyto 8,  chlo 1,  nucl 1,  E.R. 1  (predict for NP_566719.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326806.1)
other 8  (predict for NP_566719.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with NRPD7 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 NRPE7 RNA polymerase Rpb7-like, N-terminal domain-containing protein [detail] 827116
6.2 AT5G49410 thiamine-phosphate synthase [detail] 835001
6.0 AT3G53220 Thioredoxin superfamily protein [detail] 824488
4.6 SEN1 splicing endonuclease 1 [detail] 823701
Coexpressed
gene list		 [Coexpressed gene list for NRPD7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256837_at
256837_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256837_at
256837_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256837_at
256837_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821862      
Refseq ID (protein) NP_001326806.1 
NP_566719.1 


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