[←][→] ath   AT3G24340 Gene
functional annotation
Function   chromatin remodeling 40  
GO BP
GO:1900370 [list] [network] positive regulation of RNA interference  (6 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_189077.1 
BLAST NP_189077.1 
Orthologous [Ortholog page] chr31 (ath)  LOC4338690 (osa)  LOC25493137 (mtr)  LOC25497866 (mtr)  LOC25498158 (mtr)  LOC25499904 (mtr)  LOC25499905 (mtr)  LOC25499907 (mtr)  LOC25499908 (mtr)  LOC100267731 (vvi)  LOC100806733 (gma)  LOC100807262 (gma)  LOC100812737 (gma)  LOC101245395 (sly)  LOC101252104 (sly)  LOC101257794 (sly)  LOC101265473 (sly)  LOC103630322 (zma)  LOC103653855 (zma)  LOC103828642 (bra)  LOC103844121 (bra)  LOC103860031 (bra)  LOC104645619 (sly)  LOC104647043 (sly)  LOC104647688 (sly)  LOC107277028 (osa) 
Subcellular
localization
wolf
nucl 5,  chlo 2,  mito 2,  chlo_mito 2  (predict for NP_189077.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for NP_189077.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 3
Genes directly connected with CHR40 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 AT1G26540 Agenet domain-containing protein [detail] 839194
5.1 AT3G04980 DNAJ heat shock N-terminal domain-containing protein [detail] 819658
5.1 AGO9 Argonaute family protein [detail] 832241
4.5 CHR42 chromatin remodeling 42 [detail] 832164
Coexpressed
gene list		 [Coexpressed gene list for CHR40]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257167_at
257167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257167_at
257167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257167_at
257167_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822023      
Refseq ID (protein) NP_189077.1 


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