[][] ath   AT3G25040 Gene
functional annotation
Function   endoplasmic reticulum retention defective 2B
GO BP
GO:0006621 [list] [network] protein retention in ER lumen  (9 genes)  IBA  
GO:0010204 [list] [network] defense response signaling pathway, resistance gene-independent  (19 genes)  IMP  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (84 genes)  IBA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005801 [list] [network] cis-Golgi network  (17 genes)  IBA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0046923 [list] [network] ER retention sequence binding  (6 genes)  IEA  
KEGG
Protein NP_566758.1 
BLAST NP_566758.1 
Orthologous [Ortholog page] LOC4335613 (osa)LOC4350496 (osa)LOC7492008 (ppo)LOC25498292 (mtr)LOC100259001 (vvi)LOC100282828 (zma)LOC100527553 (gma)LOC100780011 (gma)LOC101264156 (sly)LOC103828588 (bra)LOC103860262 (bra)
Subcellular
localization
wolf
extr 2,  E.R. 2,  golg 2,  cyto 1,  vacu 1  (predict for NP_566758.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_566758.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 5
ath00513 Various types of N-glycan biosynthesis 5
ath04141 Protein processing in endoplasmic reticulum 5
ath00100 Steroid biosynthesis 3
Genes directly connected with ERD2B on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.3 AT4G08520 SNARE-like superfamily protein [detail] 826411
7.7 AT2G01720 Ribophorin I [detail] 814701
7.5 AT1G77350 keratinocyte-associated-like protein [detail] 844071
7.1 LAG1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [detail] 822140
6.5 AT1G34350 Tmem18 [detail] 840336
5.5 STE1 sterol 1 [detail] 820679
Coexpressed
gene list
[Coexpressed gene list for ERD2B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257104_at
257104_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257104_at
257104_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
257104_at
257104_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 822095    
Refseq ID (protein) NP_566758.1 


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