[←][→] ath   AT3G26560 Gene
functional annotation
Function   ATP-dependent RNA helicase  
GO BP
GO:0000390 [list] [network] spliceosomal complex disassembly  (3 genes)  IBA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_189288.1 
BLAST NP_189288.1 
Orthologous [Ortholog page] LOC4329095 (osa)  LOC9267698 (osa)  LOC11443762 (mtr)  LOC25482189 (mtr)  LOC100241659 (vvi)  LOC100781090 (gma)  LOC100790809 (gma)  LOC100815173 (gma)  LOC101266273 (sly)  LOC101267328 (sly)  LOC103626876 (zma)  LOC103642764 (zma)  LOC103875292 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_189288.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_189288.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with AT3G26560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 emb1507 U5 small nuclear ribonucleoprotein helicase [detail] 838690
9.9 GTA2 global transcription factor group A2 [detail] 826391
9.8 AT3G15120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820743
9.2 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing protein [detail] 844433
8.6 SPT16 global transcription factor C [detail] 826665
8.3 AT5G41770 crooked neck protein, putative / cell cycle protein [detail] 834182
7.8 STIPL1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 838277
7.7 TOC132 multimeric translocon complex in the outer envelope membrane 132 [detail] 816165
7.5 AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817938
7.1 CDC48C cell division cycle 48C [detail] 821105
6.9 AT3G51650 stress response NST1-like protein [detail] 824328
6.8 AT5G51280 DEAD-box protein abstrakt [detail] 835202
6.3 AT2G32910 DCD (Development and Cell Death) domain protein [detail] 817853
6.2 SMC5 structural maintenance of chromosomes 5 [detail] 831449
Coexpressed
gene list		 [Coexpressed gene list for AT3G26560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257310_at
257310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257310_at
257310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257310_at
257310_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822264      
Refseq ID (protein) NP_189288.1 


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