[←][→] ath   AT3G27100 Gene
functional annotation
Function   transcription/mRNA export factor  
GO BP
GO:0035616 [list] [network] histone H2B conserved C-terminal lysine deubiquitination  (2 genes)  IMP  
GO:0006406 [list] [network] mRNA export from nucleus  (30 genes)  IEA  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IEA  
GO CC
GO:0071819 [list] [network] DUBm complex  (2 genes)  IPI  
GO:0000124 [list] [network] SAGA complex  (12 genes)  IEA  
GO:0070461 [list] [network] SAGA-type complex  (15 genes)  IPI  
GO:0005643 [list] [network] nuclear pore  (52 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (36 genes)  IEA  
KEGG
Protein NP_001319653.1  NP_189346.2 
BLAST NP_001319653.1  NP_189346.2 
Orthologous [Ortholog page] LOC4327741 (osa)  LOC25497920 (mtr)  LOC100193962 (zma)  LOC100258382 (vvi)  LOC100282361 (zma)  LOC100500039 (gma)  LOC100527713 (gma)  LOC101249142 (sly)  LOC103836979 (bra)  LOC103875417 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 4,  plas 1,  extr 1,  E.R. 1,  E.R._plas 1  (predict for NP_001319653.1)
cyto 5,  nucl 2,  pero 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_189346.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001319653.1)
other 9  (predict for NP_189346.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G27100 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT1G16810 7-dehydrocholesterol reductase-like protein [detail] 838252
6.9 AT5G09830 BolA-like family protein [detail] 830843
6.9 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
Coexpressed
gene list		 [Coexpressed gene list for AT3G27100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257780_at
257780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257780_at
257780_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257780_at
257780_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822329      
Refseq ID (protein) NP_001319653.1 
NP_189346.2 


The preparation time of this page was 0.3 [sec].