[←][→] ath   AT3G28480 Gene
functional annotation
Function   Oxoglutarate/iron-dependent oxygenase  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0000137 [list] [network] Golgi cis cisterna  (41 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0031418 [list] [network] L-ascorbic acid binding  (23 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG ath00330 [list] [network] Arginine and proline metabolism (54 genes)
Protein NP_001189994.1  NP_566838.1 
BLAST NP_001189994.1  NP_566838.1 
Orthologous [Ortholog page] AT3G28490 (ath)  LOC4334477 (osa)  LOC4342642 (osa)  LOC4348615 (osa)  LOC7495938 (ppo)  LOC11434433 (mtr)  LOC100193935 (zma)  LOC100242241 (vvi)  LOC100272381 (zma)  LOC100274058 (zma)  LOC100383727 (zma)  LOC100805097 (gma)  LOC100819289 (gma)  LOC101249044 (sly)  LOC101262682 (sly)  LOC103837019 (bra)  LOC103875148 (bra)  LOC107280232 (osa) 
Subcellular
localization
wolf
chlo 7,  extr 2  (predict for NP_001189994.1)
chlo 6,  extr 2,  vacu 1  (predict for NP_566838.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_001189994.1)
scret 8  (predict for NP_566838.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT3G28480 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated protein family [detail] 814880
8.0 AT3G45620 Transducin/WD40 repeat-like superfamily protein [detail] 823704
8.0 AT1G75510 Transcription initiation factor IIF, beta subunit [detail] 843887
7.3 MKK2 MAP kinase kinase 2 [detail] 829103
7.0 AT3G03560 hypothetical protein [detail] 821235
6.2 MPK4 MAP kinase 4 [detail] 828151
6.0 AT5G27830 folate receptor family protein [detail] 832845
5.8 ERO2 endoplasmic reticulum oxidoreductins 2 [detail] 818481
5.6 ABCB27 transporter associated with antigen processing protein 2 [detail] 833896
5.6 AT4G25900 Galactose mutarotase-like superfamily protein [detail] 828696
5.2 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase [detail] 835725
4.4 ANK1 ankyrin-like1 [detail] 831855
Coexpressed
gene list		 [Coexpressed gene list for AT3G28480]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257844_at
257844_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257844_at
257844_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257844_at
257844_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822478      
Refseq ID (protein) NP_001189994.1 
NP_566838.1 


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