[←][→] ath   AT3G28730 Gene
functional annotation
Function   high mobility group  
GO BP
GO:0000741 [list] [network] karyogamy  (31 genes)  IMP  
GO:0010197 [list] [network] polar nucleus fusion  (31 genes)  IMP  
GO:0006260 [list] [network] DNA replication  (120 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO CC
GO:0035101 [list] [network] FACT complex  (3 genes)  IBA IDA  
GO:0005719 [list] [network] nuclear euchromatin  (6 genes)  IDA  
GO:0000790 [list] [network] nuclear chromatin  (80 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0031491 [list] [network] nucleosome binding  (20 genes)  IBA  
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_189515.1 
BLAST NP_189515.1 
Orthologous [Ortholog page] LOC542007 (zma)  LOC4325652 (osa)  LOC4337994 (osa)  LOC7472609 (ppo)  LOC7482452 (ppo)  LOC11421264 (mtr)  LOC25482152 (mtr)  LOC100249277 (vvi)  LOC100780190 (gma)  LOC100805034 (gma)  LOC101259798 (sly)  LOC103630072 (zma)  LOC103854188 (bra)  LOC103875134 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_189515.1)
Subcellular
localization
TargetP
other 7  (predict for NP_189515.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with HMG on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 NRPB2 DNA-directed RNA polymerase family protein [detail] 828259
7.7 SPT16 global transcription factor C [detail] 826665
7.4 CHR11 chromatin-remodeling protein 11 [detail] 819814
7.3 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein [detail] 820841
7.2 emb1967 Forkhead-associated (FHA) domain-containing protein [detail] 824602
6.8 emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein [detail] 842312
6.6 AT1G72090 Methylthiotransferase [detail] 843540
Coexpressed
gene list		 [Coexpressed gene list for HMG]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256590_at
256590_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256590_at
256590_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256590_at
256590_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822505      
Refseq ID (protein) NP_189515.1 


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