ATTED-II : GeneID search result

[←][→] ath AT3G45540 Gene

functional annotation

Function

RING/U-box protein with C6HC-type zinc finger

GO BP

GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process	(38 genes)	IBA
GO:0000209 [list] [network] protein polyubiquitination	(71 genes)	IBA
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(436 genes)	IBA

GO CC

GO:0000151 [list] [network] ubiquitin ligase complex	(277 genes)	IBA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IBA

GO MF

GO:0031624 [list] [network] ubiquitin conjugating enzyme binding	(43 genes)	IBA
GO:0061630 [list] [network] ubiquitin protein ligase activity	(204 genes)	IBA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_001325919.1 NP_190140.1

BLAST

NP_001325919.1 NP_190140.1

Orthologous

[Ortholog page] LOC103829902 (bra)

Subcellular
localization
wolf

nucl 5, cyto 3, chlo 1, mito 1, E.R. 1, chlo_mito 1	(predict for NP_001325919.1)
cyto 6, nucl 3	(predict for NP_190140.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001325919.1)
other 8	(predict for NP_190140.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT3G45540]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252583_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252583_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252583_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823695
Refseq ID (protein)	NP_001325919.1
Refseq ID (protein)	NP_190140.1

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