[←][→] ath   AT3G46510 Gene
functional annotation
Function   plant U-box 13  
GO BP
GO:0043066 [list] [network] negative regulation of apoptotic process  (5 genes)  IMP  
GO:0007166 [list] [network] cell surface receptor signaling pathway  (18 genes)  IEA  
GO:0050777 [list] [network] negative regulation of immune response  (25 genes)  IGI  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA  
GO MF
GO:0070696 [list] [network] transmembrane receptor protein serine/threonine kinase binding  (8 genes)  IPI  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_190235.1 
BLAST NP_190235.1 
Orthologous [Ortholog page] LOC4332412 (osa)  LOC4352575 (osa)  LOC7485711 (ppo)  LOC7488126 (ppo)  LOC25492506 (mtr)  LOC100191442 (zma)  LOC100258708 (vvi)  LOC100304296 (zma)  LOC100502260 (zma)  LOC100812160 (gma)  LOC100815575 (gma)  LOC101250310 (sly)  LOC101255460 (sly)  LOC103873307 (bra)  LOC103873693 (bra) 
Subcellular
localization
wolf
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_190235.1)
Subcellular
localization
TargetP
other 7  (predict for NP_190235.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with PUB13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 SGT1B phosphatase-like protein [detail] 826728
5.6 AT4G31170 Protein kinase superfamily protein [detail] 829245
5.6 NAC017 NAC domain containing protein 17 [detail] 840318
5.0 AT1G58110 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 842178
Coexpressed
gene list		 [Coexpressed gene list for PUB13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252486_at
252486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252486_at
252486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252486_at
252486_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823804      
Refseq ID (protein) NP_190235.1 


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