[←][→] ath   AT3G46580 Gene
functional annotation
Function   methyl-CPG-binding domain protein 5  
GO BP
GO CC
GO:0010370 [list] [network] perinucleolar chromocenter  (2 genes)  IDA  
GO:0005720 [list] [network] nuclear heterochromatin  (12 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008327 [list] [network] methyl-CpG binding  (16 genes)  IDA ISS  
GO:0043621 [list] [network] protein self-association  (96 genes)  IDA  
GO:0019899 [list] [network] enzyme binding  (436 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_190242.1 
BLAST NP_190242.1 
Orthologous [Ortholog page] MBD6 (ath)  MBD7 (ath)  LOC7485704 (ppo)  LOC7488137 (ppo)  LOC11408909 (mtr)  LOC11412807 (mtr)  LOC25491275 (mtr)  LOC100243225 (vvi)  LOC100255377 (vvi)  LOC100779601 (gma)  LOC100795916 (gma)  LOC100853337 (vvi)  MBD5 (sly)  LOC101267579 (sly)  LOC103845401 (bra)  LOC103846163 (bra)  LOC103851547 (bra)  LOC103851580 (bra)  LOC103856605 (bra)  LOC103856635 (bra)  LOC103873723 (bra)  LOC109123718 (vvi) 
Subcellular
localization
wolf
nucl 9  (predict for NP_190242.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_190242.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with MBD5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.7 TIM17-3 translocase inner membrane subunit 17-3 [detail] 831041
4.5 NRPD4 RNA polymerase II, Rpb4, core protein [detail] 827277
4.2 AT3G07200 RING/U-box superfamily protein [detail] 819908
Coexpressed
gene list		 [Coexpressed gene list for MBD5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252480_at
252480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252480_at
252480_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252480_at
252480_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823811      
Refseq ID (protein) NP_190242.1 


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