[←][→] ath   AT3G47550 Gene
functional annotation
Function   RING/FYVE/PHD zinc finger superfamily protein  
GO BP
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_190339.1  NP_850667.1  NP_850668.1  NP_974396.1 
BLAST NP_190339.1  NP_850667.1  NP_850668.1  NP_974396.1 
Orthologous [Ortholog page] AT1G14260 (ath)  LOC4329759 (osa)  LOC4345666 (osa)  LOC4347044 (osa)  LOC4350860 (osa)  LOC7492938 (ppo)  LOC7498170 (ppo)  LOC11418055 (mtr)  LOC25502689 (mtr)  LOC100193371 (zma)  LOC100250124 (vvi)  LOC100256824 (vvi)  LOC100281338 (zma)  LOC100284144 (zma)  LOC100284488 (zma)  LOC100779674 (gma)  LOC100812998 (gma)  LOC100817542 (gma)  LOC101247951 (sly)  LOC101254808 (sly)  LOC101260808 (sly)  LOC101267890 (sly)  LOC103842978 (bra)  LOC103872120 (bra)  LOC103873230 (bra)  LOC103875455 (bra) 
Subcellular
localization
wolf
plas 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cysk_nucl 1  (predict for NP_190339.1)
cyto 3,  nucl 2,  E.R. 2,  golg 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_850667.1)
plas 4,  nucl 1,  vacu 1,  chlo 1,  extr 1,  E.R. 1,  golg 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_850668.1)
plas 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cysk_nucl 1  (predict for NP_974396.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_190339.1)
other 8,  chlo 3  (predict for NP_850667.1)
other 8,  chlo 3  (predict for NP_850668.1)
other 8,  chlo 3  (predict for NP_974396.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with AT3G47550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT1G63830 PLAC8 family protein [detail] 842686
6.5 ATSIK Protein kinase superfamily protein [detail] 820023
6.2 AT1G19310 RING/U-box superfamily protein [detail] 838513
6.1 AT5G04170 Calcium-binding EF-hand family protein [detail] 830295
5.6 XBAT35 hypothetical protein [detail] 821907
5.2 AT1G12760 Zinc finger, C3HC4 type (RING finger) family protein [detail] 837832
5.1 RHA3B RING-H2 finger A3B [detail] 829700
Coexpressed
gene list		 [Coexpressed gene list for AT3G47550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252422_at
252422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252422_at
252422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252422_at
252422_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823909      
Refseq ID (protein) NP_190339.1 
NP_850667.1 
NP_850668.1 
NP_974396.1 


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