[←][→] ath   AT3G48070 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (21 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
KEGG
Protein NP_001030828.1  NP_001326456.1  NP_190390.1 
BLAST NP_001030828.1  NP_001326456.1  NP_190390.1 
Orthologous [Ortholog page] AT5G62910 (ath)  LOC4336079 (osa)  LOC7484770 (ppo)  LOC9268562 (osa)  LOC11423781 (mtr)  LOC100248510 (vvi)  LOC100261085 (vvi)  LOC100276679 (zma)  LOC100792365 (gma)  LOC100796324 (gma)  LOC101259850 (sly)  LOC101261009 (sly)  LOC103855031 (bra)  LOC103873176 (bra)  LOC103874728 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for NP_001030828.1)
nucl 6,  cyto 3  (predict for NP_001326456.1)
chlo 6,  nucl 4  (predict for NP_190390.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001030828.1)
other 7  (predict for NP_001326456.1)
chlo 9  (predict for NP_190390.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G48070 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 AT5G62910 RING/U-box superfamily protein [detail] 836411
5.2 AT3G47850 tRNA (Ile)-lysidine synthase [detail] 823941
5.0 AT4G27680 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 828882
Coexpressed
gene list		 [Coexpressed gene list for AT3G48070]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252371_at
252371_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252371_at
252371_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252371_at
252371_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823962      
Refseq ID (protein) NP_001030828.1 
NP_001326456.1 
NP_190390.1 


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