[←][→] ath   AT3G48120 Gene
functional annotation
Function   serine/arginine-rich splicing factor  
GO BP
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (11 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
KEGG
Protein NP_001325668.1  NP_190395.3 
BLAST NP_001325668.1  NP_190395.3 
Orthologous [Ortholog page] LOC4324119 (osa)  LOC11405588 (mtr)  LOC100258813 (vvi)  LOC100280368 (zma)  LOC100795790 (gma)  LOC100798704 (gma)  LOC101260908 (sly)  LOC108868768 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001325668.1)
nucl 10  (predict for NP_190395.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001325668.1)
other 8  (predict for NP_190395.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G48120 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT5G53800 nucleic acid-binding protein [detail] 835461
6.3 AT4G27120 DDRGK domain protein [detail] 828820
6.1 AT5G17440 LUC7 related protein [detail] 831610
Coexpressed
gene list		 [Coexpressed gene list for AT3G48120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252405_at
252405_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252405_at
252405_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252405_at
252405_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823967      
Refseq ID (protein) NP_001325668.1 
NP_190395.3 


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