| functional annotation |
| Function |
DP-E2F-like 1 |
|
| GO BP |
|
GO:0032876 [list] [network] negative regulation of DNA endoreduplication
|
(7 genes)
|
IGI
|
 |
|
GO:0042023 [list] [network] DNA endoreduplication
|
(21 genes)
|
IMP
|
|
|
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II
|
(45 genes)
|
IBA
|
|
|
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II
|
(206 genes)
|
IBA
|
|
|
GO:0051726 [list] [network] regulation of cell cycle
|
(216 genes)
|
IBA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific
|
(94 genes)
|
IBA
|
|
|
GO:0008134 [list] [network] transcription factor binding
|
(173 genes)
|
IBA
|
|
|
GO:0043565 [list] [network] sequence-specific DNA binding
|
(796 genes)
|
IBA
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
IBA
ISS
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IBA
IDA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_190399.2
NP_851012.1
|
| BLAST |
NP_190399.2
NP_851012.1
|
| Orthologous |
[Ortholog page]
LOC4330674 (osa)
LOC4340638 (osa)
LOC7474870 (ppo)
LOC11405587 (mtr)
LOC100241701 (vvi)
LOC100266295 (vvi)
LOC100381405 (zma)
LOC100795252 (gma)
LOC100806151 (gma)
LOC100818090 (gma)
LOC101259523 (sly)
LOC101264581 (sly)
LOC103627702 (zma)
LOC103629955 (zma)
LOC103873170 (bra)
LOC103874205 (bra)
|
Subcellular
localization
wolf |
|
nucl 6,
cyto_nucl 4,
cyto 1,
chlo 1,
pero 1,
cysk 1
|
(predict for NP_190399.2)
|
|
nucl 4,
cyto_nucl 3,
chlo 1,
cyto 1,
chlo_mito 1,
mito 1,
extr 1,
pero 1,
cysk 1
|
(predict for NP_851012.1)
|
|
Subcellular
localization
TargetP |
|
other 7
|
(predict for NP_190399.2)
|
|
other 7
|
(predict for NP_851012.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03030 |
DNA replication |
5 |
 |
| ath03440 |
Homologous recombination |
4 |
 |
| ath03420 |
Nucleotide excision repair |
3 |
 |
| ath03430 |
Mismatch repair |
3 |
 |
Genes directly connected with DEL1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 11.6 |
RPA70B |
RPA70-kDa subunit B |
[detail] |
830696 |
| 11.2 |
RPA70D |
Replication factor-A protein 1-like protein |
[detail] |
836221 |
| 10.6 |
ABAP1 |
ARMADILLO BTB protein 1 |
[detail] |
831145 |
| 9.4 |
AT5G06590 |
hypothetical protein |
[detail] |
830547 |
| 6.5 |
AT4G20325 |
ribonuclease H2 subunit B |
[detail] |
5008148 |
|
Coexpressed
gene list |
[Coexpressed gene list for DEL1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AT3G48160 Gene
