[←][→] ath   AT3G49990 Gene
functional annotation
Function   Low temperature viability protein  
GO BP
GO:0000056 [list] [network] ribosomal small subunit export from nucleus  (4 genes)  IBA  
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (62 genes)  IBA  
GO CC
GO:0034448 [list] [network] EGO complex  (1 genes)  IBA  
GO:0030688 [list] [network] preribosome, small subunit precursor  (9 genes)  IBA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
KEGG
Protein NP_190568.1 
BLAST NP_190568.1 
Orthologous [Ortholog page] LOC4332942 (osa)  LOC7490674 (ppo)  LOC7493941 (ppo)  LOC11414619 (mtr)  LOC100247237 (vvi)  LOC100283285 (zma)  LOC100793853 (gma)  LOC100805612 (gma)  LOC101251881 (sly)  LOC103635543 (zma)  LOC103637271 (zma)  LOC103860640 (bra)  LOC109941202 (zma)  LOC109942216 (zma) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_190568.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190568.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
Genes directly connected with AT3G49990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.6 AT2G40430 Nop53 protein [detail] 818636
9.9 AT3G01160 pre-rRNA-processing ESF1-like protein [detail] 820504
9.3 AT5G60990 DEA(D/H)-box RNA helicase family protein [detail] 836220
9.1 AT3G02760 Class II aaRS and biotin synthetases superfamily protein [detail] 820930
8.9 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820563
7.6 AT4G25210 DNA-binding storekeeper protein-related transcriptional regulator [detail] 828624
7.1 AT4G02820 Pentatricopeptide repeat (PPR) superfamily protein [detail] 828169
Coexpressed
gene list		 [Coexpressed gene list for AT3G49990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252239_at
252239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252239_at
252239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252239_at
252239_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824161      
Refseq ID (protein) NP_190568.1 


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