[←][→] ath   AT3G51950 Gene
functional annotation
Function   Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein  
GO BP
GO CC
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001030840.1  NP_001326632.1  NP_001326633.1  NP_190763.1 
BLAST NP_001030840.1  NP_001326632.1  NP_001326633.1  NP_190763.1 
Orthologous [Ortholog page] AT3G63450 (ath)  AT5G12440 (ath)  LOC4332722 (osa)  LOC4332723 (osa)  LOC4344312 (osa)  LOC7467382 (ppo)  LOC7467974 (ppo)  LOC7478510 (ppo)  LOC11440909 (mtr)  LOC11442586 (mtr)  LOC25479457 (mtr)  LOC25490433 (mtr)  LOC100191777 (zma)  LOC100192560 (zma)  LOC100251683 (vvi)  LOC100260228 (vvi)  LOC100381877 (zma)  LOC100384253 (zma)  LOC100778061 (gma)  LOC100797806 (gma)  LOC100801341 (gma)  LOC100801807 (gma)  LOC100804623 (gma)  LOC100818923 (gma)  LOC101253233 (sly)  ZAT6 (sly)  ZAT12 (sly)  LOC101268348 (sly)  LOC101268764 (sly)  LOC103653706 (zma)  LOC103654303 (zma)  LOC103841132 (bra)  LOC103846638 (bra)  LOC103855979 (bra)  LOC103860736 (bra)  LOC103863500 (bra)  LOC104647593 (sly)  LOC107277964 (osa) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001030840.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326632.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326633.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_190763.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001030840.1)
other 9  (predict for NP_001326632.1)
other 9  (predict for NP_001326633.1)
other 9  (predict for NP_190763.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G51950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT5G09460 transcription factor bHLH143 [detail] 830805
6.0 AT5G19390 Rho GTPase activation protein (RhoGAP) with PH domain-containing protein [detail] 832059
5.3 AT4G37080 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547) [detail] 829862
5.1 AT5G12900 DNA double-strand break repair RAD50 ATPase [detail] 831130
4.1 BZIP24 basic leucine zipper 24 [detail] 824359
Coexpressed
gene list		 [Coexpressed gene list for AT3G51950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252033_at
252033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252033_at
252033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252033_at
252033_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824358      
Refseq ID (protein) NP_001030840.1 
NP_001326632.1 
NP_001326633.1 
NP_190763.1 


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