[←][→] ath   AT3G52390 Gene
functional annotation
Function   TatD related DNase  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016888 [list] [network] endodeoxyribonuclease activity, producing 5'-phosphomonoesters  (6 genes)  IEA  
KEGG
Protein NP_190807.3  NP_974418.1 
BLAST NP_190807.3  NP_974418.1 
Orthologous [Ortholog page] LOC4342437 (osa)  LOC25499497 (mtr)  LOC100260602 (vvi)  LOC100282974 (zma)  LOC100814321 (gma)  LOC101245169 (sly)  LOC103863468 (bra) 
Subcellular
localization
wolf
cyto 6,  plas 1,  nucl 1,  mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1  (predict for NP_190807.3)
cyto 6,  nucl 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_974418.1)
Subcellular
localization
TargetP
other 6  (predict for NP_190807.3)
other 7  (predict for NP_974418.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G52390 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT3G18510 ATP-dependent helicase/nuclease subunit [detail] 821381
7.4 AT3G15140 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 820745
7.1 AT3G53220 Thioredoxin superfamily protein [detail] 824488
6.8 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [detail] 843574
5.8 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835075
Coexpressed
gene list		 [Coexpressed gene list for AT3G52390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252043_at
252043_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252043_at
252043_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252043_at
252043_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824404      
Refseq ID (protein) NP_190807.3 
NP_974418.1 


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