[←][→] ath   AT3G52850 Gene
functional annotation
Function   vacuolar sorting receptor homolog 1  
GO BP
GO:0006896 [list] [network] Golgi to vacuole transport  (19 genes)  IBA IDA ISS  
GO:0006623 [list] [network] protein targeting to vacuole  (36 genes)  IBA IGI IMP TAS  
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0017119 [list] [network] Golgi transport complex  (15 genes)  IBA IPI  
GO:0030665 [list] [network] clathrin-coated vesicle membrane  (25 genes)  IEA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IEA  
GO:0005623 [list] [network] cell  (76 genes)  ISS  
GO:0005770 [list] [network] late endosome  (91 genes)  IDA  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IBA IDA TAS  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005622 [list] [network] intracellular  (21658 genes)  ISS  
GO MF
GO:0009940 [list] [network] amino-terminal vacuolar sorting propeptide binding  (1 genes)  IDA  
GO:0010209 [list] [network] vacuolar sorting signal binding  (2 genes)  IPI  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_190853.1 
BLAST NP_190853.1 
Orthologous [Ortholog page] LOC542350 (zma)  VSR4 (ath)  VSR3 (ath)  VSR2 (ath)  LOC4332756 (osa)  LOC4344294 (osa)  LOC4348376 (osa)  LOC4351323 (osa)  LOC7468091 (ppo)  LOC7478654 (ppo)  LOC7478736 (ppo)  LOC9269169 (osa)  LOC11412722 (mtr)  LOC11427260 (mtr)  LOC11429925 (mtr)  LOC11437909 (mtr)  LOC100191845 (zma)  LOC100265163 (vvi)  LOC100265315 (vvi)  LOC100383090 (zma)  LOC100383531 (zma)  LOC100776184 (gma)  LOC100777949 (gma)  LOC100803958 (gma)  LOC100806422 (gma)  LOC100807514 (gma)  LOC100807869 (gma)  LOC100815266 (gma)  LOC100820115 (gma)  LOC101260562 (sly)  LOC101261176 (sly)  LOC101266168 (sly)  LOC103634617 (zma)  LOC103647159 (zma)  LOC103841217 (bra)  LOC103847965 (bra)  LOC103850264 (bra)  LOC103850729 (bra)  LOC103860403 (bra)  LOC103867094 (bra) 
Subcellular
localization
wolf
plas 6,  golg_plas 4,  golg 2  (predict for NP_190853.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_190853.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VSR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.5 AT4G36195 Serine carboxypeptidase S28 family protein [detail] 829777
7.4 AT1G52420 UDP-Glycosyltransferase superfamily protein [detail] 841673
7.1 TPP2 tripeptidyl peptidase ii [detail] 827833
6.5 BGLU25 beta glucosidase 25 [detail] 821201
5.5 AT3G19990 E3 ubiquitin-protein ligase [detail] 821537
Coexpressed
gene list		 [Coexpressed gene list for VSR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252027_at
252027_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252027_at
252027_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252027_at
252027_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824451      
Refseq ID (protein) NP_190853.1 


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