[←][→] ath   AT3G53360 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein  
GO BP
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO MF
KEGG
Protein NP_001319736.1  NP_190904.1 
BLAST NP_001319736.1  NP_190904.1 
Orthologous [Ortholog page] LOC4341131 (osa)  LOC11429894 (mtr)  LOC100273844 (zma)  LOC100786133 (gma)  LOC100810873 (gma)  LOC100854969 (vvi)  LOC101248513 (sly)  LOC103841262 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001319736.1)
nucl 6,  chlo 4  (predict for NP_190904.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001319736.1)
mito 3  (predict for NP_190904.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G53360 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.1 AT2G01510 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 814680
11.7 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820319
11.5 AT3G49142 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 10723034
11.1 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 838340
10.9 AT3G09060 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820059
9.5 AT2G22070 pentatricopeptide (PPR) repeat-containing protein [detail] 816742
9.4 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 827618
9.2 AT1G07740 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837288
9.2 MEF9 mitochondrial editing factor 9 [detail] 842523
8.7 AT3G09040 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820057
8.5 POP1 ribonuclease Ps [detail] 819343
8.0 ABCG41 pleiotropic drug resistance 13 [detail] 827186
6.4 AT1G23450 PPR superfamily protein [detail] 838953
6.2 AT1G22830 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 838888
5.1 AT1G28715 [detail] 28717274
Coexpressed
gene list		 [Coexpressed gene list for AT3G53360]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251965_at
251965_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251965_at
251965_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251965_at
251965_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824504      
Refseq ID (protein) NP_001319736.1 
NP_190904.1 


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