[←][→] ath   AT3G53710 Gene
functional annotation
Function   ARF-GAP domain 6  
GO BP
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001030854.1  NP_001319740.1  NP_190939.1 
BLAST NP_001030854.1  NP_001319740.1  NP_190939.1 
Orthologous [Ortholog page] AGD7 (ath)  LOC4332427 (osa)  LOC11419488 (mtr)  LOC25484131 (mtr)  LOC100251169 (vvi)  LOC100284393 (zma)  LOC100778302 (gma)  LOC100792658 (gma)  LOC100801306 (gma)  LOC100806519 (gma)  LOC101251611 (sly)  LOC101260680 (sly)  LOC101263690 (sly)  LOC103634469 (zma)  LOC103649507 (zma)  LOC103841292 (bra)  LOC103857718 (bra)  LOC103863384 (bra)  LOC103865607 (bra)  LOC103867187 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001030854.1)
nucl 10  (predict for NP_001319740.1)
nucl 10  (predict for NP_190939.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for NP_001030854.1)
mito 7,  other 4  (predict for NP_001319740.1)
mito 7,  other 4  (predict for NP_190939.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath00051 Fructose and mannose metabolism 2
ath04144 Endocytosis 2
Genes directly connected with AGD6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AGD7 ARF-GAP domain 7 [detail] 818331
6.0 ARG1 Chaperone DnaJ-domain superfamily protein [detail] 843166
5.4 AT4G01395 conserved oligomeric Golgi complex subunit 4 [detail] 827943
Coexpressed
gene list		 [Coexpressed gene list for AGD6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251905_at
251905_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251905_at
251905_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251905_at
251905_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824538      
Refseq ID (protein) NP_001030854.1 
NP_001319740.1 
NP_190939.1 


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