[←][→] ath   AT3G54220 Gene
functional annotation
Function   GRAS family transcription factor  
GO BP
GO:0090610 [list] [network] bundle sheath cell fate specification  (2 genes)  IBA IMP  
GO:0051457 [list] [network] maintenance of protein location in nucleus  (3 genes)  IBA IMP  
GO:0009956 [list] [network] radial pattern formation  (23 genes)  IBA IMP  
GO:0008356 [list] [network] asymmetric cell division  (24 genes)  IBA IMP  
GO:0009630 [list] [network] gravitropism  (90 genes)  IBA IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IBA IGI  
GO:0048364 [list] [network] root development  (482 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA IMP ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_190990.1 
BLAST NP_190990.1 
Orthologous [Ortholog page] LOC4349638 (osa)  LOC4351362 (osa)  LOC11423464 (mtr)  LOC100265598 (vvi)  LOC100274320 (zma)  LOC100382261 (zma)  LOC100803919 (gma)  LOC100806779 (gma)  LOC101255150 (sly)  LOC103841338 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_190990.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_190990.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SCR on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT4G28100 transmembrane protein [detail] 828926
5.9 AT1G10850 Leucine-rich repeat protein kinase family protein [detail] 3766694
5.1 HAM3 GRAS family transcription factor [detail] 828208
5.0 AT1G16020 vacuolar fusion protein (DUF1712) [detail] 838172
Coexpressed
gene list		 [Coexpressed gene list for SCR]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251890_at
251890_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251890_at
251890_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251890_at
251890_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824589      
Refseq ID (protein) NP_190990.1 


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