[←][→] ath   At3g54680 Gene
functional annotation
Function   proteophosphoglycan-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019439 [list] [network] aromatic compound catabolic process  (137 genes)  IEA  
GO:1901361 [list] [network] organic cyclic compound catabolic process  (149 genes)  IEA  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IEA  
GO:1901605 [list] [network] alpha-amino acid metabolic process  (278 genes)  IEA  
GO:1901565 [list] [network] organonitrogen compound catabolic process  (591 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_567006.1 
BLAST NP_567006.1 
Orthologous [Ortholog page] LOC543591 (sly)  LOC18104166 (ppo)  LOC18104535 (ppo)  LOC25487716 (mtr)  LOC100779201 (gma)  LOC100798711 (gma)  LOC103829988 (bra)  LOC103841372 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  pero 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_567006.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_567006.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath04016 MAPK signaling pathway - plant 4
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT3G54680 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 AT1G77770 forkhead box protein, putative (DUF1644) [detail] 844114
5.3 HAB1 HYPERSENSITIVE TO ABA1 [detail] 843609
5.3 UBC32 ubiquitin-conjugating enzyme 32 [detail] 820956
Coexpressed
gene list		 [Coexpressed gene list for AT3G54680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251859_at
251859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251859_at
251859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251859_at
251859_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824633      
Refseq ID (protein) NP_567006.1 


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