[←][→] ath   AT3G54780 Gene
functional annotation
Function   Zinc finger (C3HC4-type RING finger) family protein  
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO MF
KEGG
Protein NP_001030861.1  NP_001326107.1  NP_001326108.1  NP_191038.2  NP_974433.2 
BLAST NP_001030861.1  NP_001326107.1  NP_001326108.1  NP_191038.2  NP_974433.2 
Orthologous [Ortholog page] AT2G38970 (ath)  AT5G60710 (ath)  AT1G08050 (ath)  LOC4330003 (osa)  LOC4331074 (osa)  LOC4331583 (osa)  LOC4336357 (osa)  LOC7465346 (ppo)  LOC9271941 (osa)  LOC11405602 (mtr)  LOC11410528 (mtr)  LOC25487823 (mtr)  LOC100191428 (zma)  LOC100217033 (zma)  LOC100233041 (vvi)  LOC100253096 (vvi)  LOC100266793 (vvi)  LOC100281657 (zma)  LOC100382472 (zma)  LOC100382510 (zma)  LOC100781344 (gma)  LOC100811322 (gma)  LOC100813569 (gma)  LOC100813784 (gma)  LOC100818239 (gma)  LOC100818406 (gma)  LOC101244547 (sly)  LOC101250694 (sly)  LOC101263576 (sly)  LOC103626190 (zma)  LOC103631700 (zma)  LOC103643483 (zma)  LOC103653783 (zma)  LOC103836407 (bra)  LOC103845486 (bra)  LOC103851487 (bra)  LOC103867066 (bra)  LOC103871549 (bra)  LOC107277649 (osa)  LOC107278368 (osa) 
Subcellular
localization
wolf
chlo 3,  nucl 3,  mito 1,  cyto_nucl 1,  cysk 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_001030861.1)
chlo 8,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_001326107.1)
chlo 8,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_001326108.1)
chlo 4,  nucl 3,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_191038.2)
nucl 4,  chlo 3,  mito 1,  cysk 1  (predict for NP_974433.2)
Subcellular
localization
TargetP
mito 1  (predict for NP_001030861.1)
other 2  (predict for NP_001326107.1)
other 2  (predict for NP_001326108.1)
other 0  (predict for NP_191038.2)
other 0  (predict for NP_974433.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G54780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein [detail] 818482
4.6 AT3G54790 ARM repeat superfamily protein [detail] 824644
4.5 AT3G52490 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein [detail] 824414
Coexpressed
gene list		 [Coexpressed gene list for AT3G54780]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824643      
Refseq ID (protein) NP_001030861.1 
NP_001326107.1 
NP_001326108.1 
NP_191038.2 
NP_974433.2 


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