[←][→] ath   AT3G54920 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0042547 [list] [network] cell wall modification involved in multidimensional cell growth  (8 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO:0009814 [list] [network] defense response, incompatible interaction  (174 genes)  IMP  
GO CC
GO:0046658 [list] [network] anchored component of plasma membrane  (154 genes)  ISS  
GO:0031225 [list] [network] anchored component of membrane  (303 genes)  TAS  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  ISS  
GO:0016829 [list] [network] lyase activity  (412 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_191052.2 
BLAST NP_191052.2 
Orthologous [Ortholog page] AT5G04310 (ath)  LOC4348800 (osa)  LOC7468445 (ppo)  LOC7479851 (ppo)  LOC25485548 (mtr)  LOC100246124 (vvi)  LOC100281581 (zma)  LOC100789303 (gma)  LOC100808438 (gma)  LOC101260911 (sly)  LOC101264881 (sly)  LOC101264933 (sly)  LOC103829999 (bra)  LOC103841403 (bra)  LOC103847312 (bra)  LOC103855563 (bra) 
Subcellular
localization
wolf
vacu 4,  extr 3,  plas 1,  golg 1,  golg_plas 1  (predict for NP_191052.2)
Subcellular
localization
TargetP
scret 5  (predict for NP_191052.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PMR6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 TTL3 tetratricopetide-repeat thioredoxin-like 3 [detail] 818858
6.3 AT1G72410 COP1-interacting protein-like protein [detail] 843573
6.3 ULT1 Developmental regulator, ULTRAPETALA [detail] 828934
5.4 CSLA07 cellulose synthase like [detail] 818134
Coexpressed
gene list		 [Coexpressed gene list for PMR6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251864_at
251864_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251864_at
251864_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251864_at
251864_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824657      
Refseq ID (protein) NP_191052.2 


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