[][] ath   AT3G55220 Gene
functional annotation
Function   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
GO BP
GO:0048481 [list] [network] plant ovule development  (57 genes)  IMP  
GO:0009846 [list] [network] pollen germination  (67 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_567016.1 
BLAST NP_567016.1 
Orthologous [Ortholog page] SAP130a (ath)LOC4328237 (osa)LOC7457908 (ppo)LOC7458613 (ppo)LOC11442895 (mtr)LOC11444450 (mtr)LOC25485734 (mtr)LOC100255210 (vvi)LOC100272422 (zma)LOC100775785 (gma)LOC100800457 (gma)LOC101266504 (sly)LOC103847020 (bra)
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_567016.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_567016.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with SAP130b on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.1 SCD1 stomatal cytokinesis defective / SCD1 protein (SCD1) [detail] 841327
7.5 SEU SEUSS transcriptional co-regulator [detail] 840981
7.4 AT3G62310 RNA helicase family protein [detail] 825404
Coexpressed
gene list
[Coexpressed gene list for SAP130b]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824688    
Refseq ID (protein) NP_567016.1 


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