[←][→] ath   AT3G55530 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0009789 [list] [network] positive regulation of abscisic acid-activated signaling pathway  (40 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IEP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19648 genes)  IDA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IDA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_191112.1 
BLAST NP_191112.1 
Orthologous [Ortholog page] LOC4332396 (osa)  LOC7481521 (ppo)  LOC7490386 (ppo)  LOC25489323 (mtr)  LOC100193208 (zma)  LOC100246103 (vvi)  LOC100260437 (vvi)  LOC100280655 (zma)  LOC100777936 (gma)  LOC100805406 (gma)  LOC100816448 (gma)  LOC101247325 (sly)  LOC103841466 (bra) 
Subcellular
localization
wolf
plas 3,  cyto_plas 2,  E.R. 2,  cyto 1,  E.R._vacu 1,  cyto_nucl 1,  mito 1,  extr 1,  vacu 1,  cysk 1  (predict for NP_191112.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_191112.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
Genes directly connected with SDIR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AVA-P4 vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [detail] 843898
5.7 AT2G28370 Uncharacterized protein family (UPF0497) [detail] 817385
5.7 ZIM GATA-type zinc finger protein with TIFY domain-containing protein [detail] 828549
5.5 AT3G56820 RmlC-type cupin [detail] 824849
Coexpressed
gene list		 [Coexpressed gene list for SDIR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251805_at
251805_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251805_at
251805_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251805_at
251805_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824718      
Refseq ID (protein) NP_191112.1 


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