[←][→] ath   AT3G56080 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein  
GO BP
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IBA  
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (340 genes)  IEA  
KEGG
Protein NP_001326626.1  NP_567033.2 
BLAST NP_001326626.1  NP_567033.2 
Orthologous [Ortholog page] AT2G40280 (ath)  LOC4327528 (osa)  LOC4339078 (osa)  LOC11406774 (mtr)  LOC11424361 (mtr)  LOC100246779 (vvi)  LOC100383917 (zma)  LOC100800390 (gma)  LOC100808221 (gma)  LOC100815451 (gma)  LOC101259443 (sly)  LOC101261924 (sly)  LOC103651052 (zma)  LOC103857924 (bra)  LOC103863121 (bra)  LOC109939206 (zma) 
Subcellular
localization
wolf
vacu 6,  plas 1,  extr 1,  chlo 1,  mito 1,  chlo_mito 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001326626.1)
vacu 6,  plas 1,  extr 1,  chlo 1,  mito 1,  chlo_mito 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_567033.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_001326626.1)
scret 8  (predict for NP_567033.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin and chlorophyll metabolism 3
Genes directly connected with AT3G56080 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.5 KUP11 K+ uptake permease 11 [detail] 818071
4.5 CH1 Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein [detail] 841029
4.4 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 828884
Coexpressed
gene list		 [Coexpressed gene list for AT3G56080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251713_at
251713_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251713_at
251713_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251713_at
251713_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824774      
Refseq ID (protein) NP_001326626.1 
NP_567033.2 


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