[←][→] ath   AT3G56120 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein  
GO BP
GO:0002939 [list] [network] tRNA N1-guanine methylation  (2 genes)  IBA  
GO:0030488 [list] [network] tRNA methylation  (26 genes)  IBA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0052906 [list] [network] tRNA (guanine(37)-N(1))-methyltransferase activity  (2 genes)  IEA  
GO:0009019 [list] [network] tRNA (guanine-N1-)-methyltransferase activity  (3 genes)  IBA  
GO:0008175 [list] [network] tRNA methyltransferase activity  (20 genes)  IBA  
KEGG
Protein NP_567034.1 
BLAST NP_567034.1 
Orthologous [Ortholog page] LOC9271157 (osa)  LOC25493940 (mtr)  LOC100266181 (vvi)  LOC100274674 (zma)  LOC100790336 (gma)  LOC100812740 (gma)  LOC101265822 (sly)  LOC103841517 (bra) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  vacu 1,  cysk 1,  cysk_nucl 1  (predict for NP_567034.1)
Subcellular
localization
TargetP
other 4  (predict for NP_567034.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT3G56120 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT2G43110 U3 containing 90S pre-ribosomal complex subunit [detail] 818913
6.8 TRM82 Transducin/WD40 repeat-like superfamily protein [detail] 839572
6.5 RRP4 ribosomal RNA processing 4 [detail] 839521
6.3 AT5G11750 Ribosomal protein L19 family protein [detail] 831047
5.6 AT2G25100 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 817048
4.4 SDN1 small RNA degrading nuclease 1 [detail] 824172
Coexpressed
gene list		 [Coexpressed gene list for AT3G56120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251712_at
251712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251712_at
251712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251712_at
251712_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824778      
Refseq ID (protein) NP_567034.1 


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