[←][→] ath   AT3G57230 Gene
functional annotation
Function   AGAMOUS-like 16  
GO BP
GO:0048574 [list] [network] long-day photoperiodism, flowering  (16 genes)  IGI  
GO:0010440 [list] [network] stomatal lineage progression  (19 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IEA  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding  (152 genes)  IEA  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IDA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IPI  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319775.1  NP_001326285.1  NP_001326286.1  NP_001326287.1  NP_191282.2 
BLAST NP_001319775.1  NP_001326285.1  NP_001326286.1  NP_001326287.1  NP_191282.2 
Orthologous [Ortholog page] LOC541764 (zma)  AGL44 (ath)  AGL17 (ath)  AGL21 (ath)  LOC4329771 (osa)  LOC4330621 (osa)  LOC4336057 (osa)  LOC4345644 (osa)  LOC7461842 (ppo)  LOC7478776 (ppo)  LOC7489787 (ppo)  LOC11407839 (mtr)  LOC11416417 (mtr)  LOC11418839 (mtr)  LOC11423803 (mtr)  LOC100242400 (vvi)  LOC100244955 (vvi)  LOC100253898 (vvi)  LOC100778427 (gma)  LOC100778970 (gma)  LOC100779647 (gma)  LOC100795778 (gma)  NMHC5 (gma)  LOC100808145 (gma)  LOC100812413 (gma)  LOC101247983 (sly)  LOC101251455 (sly)  LOC101262808 (sly)  LOC103643284 (zma)  LOC103646360 (zma)  LOC103653464 (zma)  LOC103655506 (zma)  LOC103835060 (bra)  LOC103840485 (bra)  LOC103842472 (bra)  LOC103847933 (bra)  LOC103856547 (bra)  LOC103862329 (bra)  LOC103864371 (bra)  LOC104878193 (vvi)  LOC104878197 (vvi) 
Subcellular
localization
wolf
nucl 4,  mito 3,  cyto_nucl 3,  chlo 1,  cysk 1,  golg_plas 1  (predict for NP_001319775.1)
nucl 5,  chlo 1,  extr 1,  pero 1,  cysk 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_001326285.1)
nucl 5,  chlo 1,  extr 1,  pero 1,  cysk 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_001326286.1)
nucl 6,  cyto_nucl 4,  mito 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for NP_001326287.1)
nucl 6,  cyto_nucl 4,  mito 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for NP_191282.2)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001319775.1)
other 3  (predict for NP_001326285.1)
other 3  (predict for NP_001326286.1)
other 5,  mito 4  (predict for NP_001326287.1)
other 5,  mito 4  (predict for NP_191282.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AGL16 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.8 AT1G69170 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [detail] 843248
4.7 AT1G09920 TRAF-type zinc finger-like protein [detail] 837524
4.5 GPX5 glutathione peroxidase 5 [detail] 825483
Coexpressed
gene list		 [Coexpressed gene list for AGL16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251672_at
251672_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251672_at
251672_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251672_at
251672_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824890      
Refseq ID (protein) NP_001319775.1 
NP_001326285.1 
NP_001326286.1 
NP_001326287.1 
NP_191282.2 


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