[←][→] ath   AT3G58040 Gene
functional annotation
Function   seven in absentia of Arabidopsis 2  
GO BP
GO:2000785 [list] [network] regulation of autophagosome assembly  (4 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA IPI  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001326739.1  NP_001326740.1  NP_191363.1 
BLAST NP_001326739.1  NP_001326740.1  NP_191363.1 
Orthologous [Ortholog page] AT2G41980 (ath)  LOC4328179 (osa)  LOC4344172 (osa)  LOC7455750 (ppo)  LOC7462783 (ppo)  LOC7463600 (ppo)  LOC7479519 (ppo)  LOC7484028 (ppo)  LOC9266295 (osa)  LOC11418493 (mtr)  LOC11418807 (mtr)  LOC11444084 (mtr)  LOC25483549 (mtr)  LOC100170243 (zma)  LOC100170244 (zma)  LOC100170245 (zma)  LOC100233085 (vvi)  LOC100244678 (vvi)  LOC100267231 (vvi)  LOC100500061 (gma)  LOC100793457 (gma)  LOC100813966 (gma)  LOC101260503 (sly)  LOC101263446 (sly)  LOC103830135 (bra)  LOC103841701 (bra)  LOC103858006 (bra)  LOC103865920 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_001326739.1)
chlo 6,  cyto 3  (predict for NP_001326740.1)
cyto 4,  chlo 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_191363.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001326739.1)
other 9  (predict for NP_001326740.1)
other 9  (predict for NP_191363.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath04141 Protein processing in endoplasmic reticulum 2
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with SINAT2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 AT2G22720 SPT2 chromatin protein [detail] 816802
5.6 UBC34 ubiquitin-conjugating enzyme 34 [detail] 838300
5.1 AT3G61790 Protein with RING/U-box and TRAF-like domain [detail] 825352
4.8 AT5G24320 Transducin/WD40 repeat-like superfamily protein [detail] 832502
4.8 AT2G41980 Protein with RING/U-box and TRAF-like domain [detail] 818798
Coexpressed
gene list		 [Coexpressed gene list for SINAT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251589_at
251589_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251589_at
251589_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251589_at
251589_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824973      
Refseq ID (protein) NP_001326739.1 
NP_001326740.1 
NP_191363.1 


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