[←][→] ath   AT3G59300 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001325759.1  NP_001325760.1  NP_567080.1 
BLAST NP_001325759.1  NP_001325760.1  NP_567080.1 
Orthologous [Ortholog page] LOC4325033 (osa)  LOC7468496 (ppo)  LOC11436593 (mtr)  LOC100253226 (vvi)  LOC100278323 (zma)  LOC100815623 (gma)  LOC101247332 (sly)  LOC103830210 (bra)  LOC103841780 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_001325759.1)
chlo 4,  nucl 2,  chlo_mito 2,  extr 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001325760.1)
chlo 4,  nucl 3,  cyto 1,  extr 1,  vacu 1,  cysk 1,  mito_plas 1  (predict for NP_567080.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_001325759.1)
chlo 8  (predict for NP_001325760.1)
chlo 8  (predict for NP_567080.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 5
ath00053 Ascorbate and aldarate metabolism 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
Genes directly connected with AT3G59300 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 UGP3 UDP-glucose pyrophosphorylase 3 [detail] 824770
5.3 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family protein [detail] 831843
4.8 SQD2 sulfoquinovosyldiacylglycerol 2 [detail] 831888
4.1 AT1G80850 DNA glycosylase superfamily protein [detail] 844424
Coexpressed
gene list		 [Coexpressed gene list for AT3G59300]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251493_at
251493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251493_at
251493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251493_at
251493_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825099      
Refseq ID (protein) NP_001325759.1 
NP_001325760.1 
NP_567080.1 


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