ATTED-II : GeneID search result

[←][→] ath AT3G60100 Gene

functional annotation

Function

citrate synthase 5

GO BP

GO:0006101 [list] [network] citrate metabolic process	(6 genes)	IEA
GO:0006099 [list] [network] tricarboxylic acid cycle	(54 genes)	IBA IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(995 genes)	IBA

GO CC

GO:0005759 [list] [network] mitochondrial matrix	(143 genes)	IBA
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	IDA ISM

GO MF

GO:0004108 [list] [network] citrate (Si)-synthase activity

(5 genes)

IBA

KEGG

ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)

ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)

ath01200 [list] [network] Carbon metabolism (273 genes)

ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)

ath01230 [list] [network] Biosynthesis of amino acids (251 genes)

Protein

NP_001327512.1 NP_001327513.1 NP_191569.2

BLAST

NP_001327512.1 NP_001327513.1 NP_191569.2

Orthologous

[Ortholog page] ATCS (ath) LOC4328598 (osa) LOC4350660 (osa) LOC25486862 (mtr) LOC100194338 (zma) LOC100261432 (vvi) LOC100279573 (zma) LOC100280203 (zma) LOC100499624 (gma) LOC100781418 (gma) LOC101249011 (sly) LOC103858130 (bra) LOC103862913 (bra) LOC103866133 (bra)

Subcellular
localization
wolf

mito 7, chlo 2	(predict for NP_001327512.1)
mito 6, cyto_mito 4, chlo 2	(predict for NP_001327513.1)
mito 6, cyto_mito 4, chlo 2	(predict for NP_191569.2)

Subcellular
localization
TargetP

mito 7	(predict for NP_001327512.1)
mito 7	(predict for NP_001327513.1)
mito 7	(predict for NP_191569.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for CSY5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251455_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251455_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251455_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825180
Refseq ID (protein)	NP_001327512.1
	NP_001327513.1
	NP_191569.2

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