[←][→] ath   AT3G60400 Gene
functional annotation
Function   Mitochondrial transcription termination factor family protein  
GO BP
GO:0006353 [list] [network] DNA-templated transcription, termination  (19 genes)  IEA  
GO:0007005 [list] [network] mitochondrion organization  (158 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO:0032502 [list] [network] developmental process  (3194 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IEA  
KEGG
Protein NP_191599.1 
BLAST NP_191599.1 
Orthologous [Ortholog page] LOC4342999 (osa)  LOC11426054 (mtr)  LOC25499985 (mtr)  LOC100244389 (vvi)  LOC100281476 (zma)  LOC100800581 (gma)  LOC100812245 (gma)  LOC101250749 (sly)  LOC103841894 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_191599.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_191599.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SHOT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 PPR40 pentatricopeptide (PPR) domain protein 40 [detail] 820944
6.4 AT5G04670 Enhancer of polycomb-like transcription factor protein [detail] 830344
6.1 AT1G61970 Mitochondrial transcription termination factor family protein [detail] 842492
5.5 FRL2 FRIGIDA like 2 [detail] 840070
5.3 BPM6 BTB-POZ and MATH domain 6 [detail] 823478
Coexpressed
gene list		 [Coexpressed gene list for SHOT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251416_at
251416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251416_at
251416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251416_at
251416_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825211      
Refseq ID (protein) NP_191599.1 


The preparation time of this page was 0.2 [sec].