[←][→] ath   AT3G61790 Gene
functional annotation
Function   Protein with RING/U-box and TRAF-like domain  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_567118.1 
BLAST NP_567118.1 
Orthologous [Ortholog page] AT4G27880 (ath)  LOC4327774 (osa)  LOC4329066 (osa)  LOC4338181 (osa)  LOC7457400 (ppo)  LOC7475187 (ppo)  LOC7486772 (ppo)  LOC7496400 (ppo)  LOC11423170 (mtr)  LOC11446457 (mtr)  LOC25499735 (mtr)  LOC25500674 (mtr)  LOC100170241 (zma)  LOC100170242 (zma)  LOC100192741 (zma)  LOC100233084 (vvi)  LOC100252009 (vvi)  LOC100279741 (zma)  LOC100779238 (gma)  LOC100792687 (gma)  LOC100810573 (gma)  LOC101246723 (sly)  LOC101253831 (sly)  LOC101257844 (sly)  SINA4 (sly)  LOC101264159 (sly)  LOC103626898 (zma)  LOC103830327 (bra)  LOC103834788 (bra)  LOC103862812 (bra)  LOC103867677 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_567118.1)
Subcellular
localization
TargetP
other 9  (predict for NP_567118.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with AT3G61790 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT1G76920 F-box family protein [detail] 844027
6.4 AT3G49800 BSD domain-containing protein [detail] 824142
6.1 AT4G21450 PapD-like superfamily protein [detail] 826300
6.0 AT1G06060 LisH and RanBPM domains containing protein [detail] 837115
5.5 PIRL3 plant intracellular ras group-related LRR 3 [detail] 837855
5.4 IBR5 indole-3-butyric acid response 5 [detail] 814997
5.1 SINAT2 seven in absentia of Arabidopsis 2 [detail] 824973
Coexpressed
gene list		 [Coexpressed gene list for AT3G61790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251283_at
251283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251283_at
251283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251283_at
251283_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825352      
Refseq ID (protein) NP_567118.1 


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