[←][→] ath   AT4G03560 Gene
functional annotation
Function   two-pore channel 1  
GO BP
GO:0080141 [list] [network] regulation of jasmonic acid biosynthetic process  (4 genes)  IMP  
GO:0019722 [list] [network] calcium-mediated signaling  (33 genes)  IMP  
GO:0070588 [list] [network] calcium ion transmembrane transport  (42 genes)  IEA  
GO:0034765 [list] [network] regulation of ion transmembrane transport  (43 genes)  IEA  
GO:0006816 [list] [network] calcium ion transport  (53 genes)  IBA IC IMP  
GO:0010119 [list] [network] regulation of stomatal movement  (88 genes)  IMP  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (169 genes)  IBA IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IBA IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  TAS  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0005245 [list] [network] voltage-gated calcium channel activity  (1 genes)  IBA IGI ISS  
GO:0005262 [list] [network] calcium channel activity  (18 genes)  IGI IMP ISS  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
KEGG
Protein NP_567258.1 
BLAST NP_567258.1 
Orthologous [Ortholog page] LOC778433 (zma)  LOC4325272 (osa)  LOC25487660 (mtr)  TPC1 (vvi)  LOC100806160 (gma)  LOC100819307 (gma)  LOC101244201 (sly)  LOC103846557 (bra)  LOC103858693 (bra) 
Subcellular
localization
wolf
plas 8,  cyto 1,  vacu 1,  pero 1,  cyto_pero 1  (predict for NP_567258.1)
Subcellular
localization
TargetP
other 9  (predict for NP_567258.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath04145 Phagosome 5
Genes directly connected with TPC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.0 SYTA synaptotagmin A [detail] 816633
4.8 AT5G63190 MA3 domain-containing protein [detail] 836440
4.8 VHA-A2 vacuolar proton ATPase A2 [detail] 816680
Coexpressed
gene list		 [Coexpressed gene list for TPC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255380_at
255380_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255380_at
255380_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255380_at
255380_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825655      
Refseq ID (protein) NP_567258.1 


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