ATTED-II : GeneID search result

[←][→] ath AT4G04190 Gene

functional annotation

Function

transmembrane protein

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001319864.1 NP_001329825.1 NP_192328.2

BLAST

NP_001319864.1 NP_001329825.1 NP_192328.2

Orthologous

[Ortholog page] LOC7478634 (ppo) LOC25480681 (mtr) LOC25492798 (mtr) LOC25493157 (mtr) LOC100191324 (zma) LOC100246564 (vvi) LOC100791151 (gma) LOC100802417 (gma) LOC101254268 (sly) LOC103839848 (bra) LOC112936015 (osa)

Subcellular
localization
wolf

nucl 6, cyto 2, plas 1, extr 1, pero 1	(predict for NP_001319864.1)
nucl 5, cyto 2, extr 2	(predict for NP_001329825.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_192328.2)

Subcellular
localization
TargetP

other 6	(predict for NP_001319864.1)
other 8	(predict for NP_001329825.1)
other 9	(predict for NP_192328.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G04190 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.5	AT3G15140	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[detail]	820745
8.9	AT5G49410	thiamine-phosphate synthase	[detail]	835001
8.6	AT3G53220	Thioredoxin superfamily protein	[detail]	824488
7.9	AT5G09270	transmembrane protein	[detail]	830786
6.2	LpxA	bacterial transferase hexapeptide repeat-containing protein	[detail]	829075
5.4	AT1G72420	NADH:ubiquinone oxidoreductase intermediate-associated protein 30	[detail]	843574

Coexpressed
gene list

[Coexpressed gene list for AT4G04190]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

255318_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

255318_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

255318_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	825734
Refseq ID (protein)	NP_001319864.1
	NP_001329825.1
	NP_192328.2

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