[←][→] ath   AT4G10710 Gene
functional annotation
Function   global transcription factor C  
GO BP
GO:0034724 [list] [network] DNA replication-independent nucleosome organization  (4 genes)  IBA  
GO:0006368 [list] [network] transcription elongation from RNA polymerase II promoter  (12 genes)  IBA  
GO:0032968 [list] [network] positive regulation of transcription elongation from RNA polymerase II promoter  (17 genes)  IBA  
GO:0006260 [list] [network] DNA replication  (120 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO CC
GO:0035101 [list] [network] FACT complex  (3 genes)  IBA IDA  
GO:0005719 [list] [network] nuclear euchromatin  (6 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0031491 [list] [network] nucleosome binding  (20 genes)  IBA  
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
KEGG
Protein NP_001329034.1  NP_001329035.1  NP_192809.1 
BLAST NP_001329034.1  NP_001329035.1  NP_192809.1 
Orthologous [Ortholog page] LOC542546 (zma)  LOC4335478 (osa)  LOC7465222 (ppo)  LOC7478879 (ppo)  LOC11406725 (mtr)  LOC11429385 (mtr)  LOC100263158 (vvi)  LOC100263194 (vvi)  LOC100785245 (gma)  LOC100792677 (gma)  LOC100793201 (gma)  LOC100819092 (gma)  LOC101247071 (sly)  LOC101260671 (sly)  LOC101261165 (sly)  LOC103858574 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  nucl_plas 1  (predict for NP_001329034.1)
nucl 9  (predict for NP_001329035.1)
cyto 5,  nucl 3,  chlo 1,  nucl_plas 1  (predict for NP_192809.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001329034.1)
other 6  (predict for NP_001329035.1)
other 6  (predict for NP_192809.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with SPT16 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 AT3G45830 nuclear factor kappa-B-binding-like protein [detail] 823726
9.0 AT4G31880 transcriptional regulator [detail] 829318
8.6 AT3G26560 ATP-dependent RNA helicase [detail] 822264
7.9 ALATS Alanyl-tRNA synthetase [detail] 841442
7.7 HMG high mobility group [detail] 822505
7.3 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein [detail] 816247
7.2 ILP1 GC-rich sequence DNA-binding factor-like protein [detail] 830755
7.1 AT3G09670 Tudor/PWWP/MBT superfamily protein [detail] 820124
6.7 AT3G22220 hAT transposon superfamily [detail] 821786
6.6 AT3G51640 stress response NST1-like protein [detail] 824327
6.4 ftsh10 FTSH protease 10 [detail] 837265
Coexpressed
gene list		 [Coexpressed gene list for SPT16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254992_at
254992_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254992_at
254992_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254992_at
254992_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826665      
Refseq ID (protein) NP_001329034.1 
NP_001329035.1 
NP_192809.1 


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