[←][→] ath   AT4G11860 Gene
functional annotation
Function   FAM63A-like protein (DUF544)  
GO BP
GO:0071108 [list] [network] protein K48-linked deubiquitination  (4 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0016807 [list] [network] cysteine-type carboxypeptidase activity  (3 genes)  IBA  
GO:1990380 [list] [network] Lys48-specific deubiquitinase activity  (3 genes)  IBA  
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IEA  
KEGG
Protein NP_567383.1 
BLAST NP_567383.1 
Orthologous [Ortholog page] LOC4342044 (osa)  LOC11437518 (mtr)  LOC100263264 (vvi)  LOC100279905 (zma)  LOC100797239 (gma)  LOC100808340 (gma)  LOC101249947 (sly)  LOC103629574 (zma)  LOC103839924 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  pero 2,  chlo 1,  cyto 1  (predict for NP_567383.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_567383.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
Genes directly connected with AT4G11860 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 PEPKR2 phosphoenolpyruvate carboxylase-related kinase 2 [detail] 837824
6.2 AT3G55070 LisH/CRA/RING-U-box domains-containing protein [detail] 824673
6.0 TKI1 TSL-kinase interacting protein 1 [detail] 818270
5.6 BPM5 BTB-POZ and MATH domain 5 [detail] 832225
5.2 AT1G53770 O-fucosyltransferase family protein [detail] 841814
Coexpressed
gene list		 [Coexpressed gene list for AT4G11860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254843_at
254843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254843_at
254843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254843_at
254843_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826793      
Refseq ID (protein) NP_567383.1 


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