[←][→] ath   AT4G13250 Gene
functional annotation
Function   NAD(P)-binding Rossmann-fold superfamily protein  
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (8 genes)  IMP  
GO:0015996 [list] [network] chlorophyll catabolic process  (14 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IC  
GO MF
GO:0034256 [list] [network] chlorophyll(ide) b reductase activity  (2 genes)  IMP  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_001190716.1  NP_567400.1 
BLAST NP_001190716.1  NP_567400.1 
Orthologous [Ortholog page] LOC4327178 (osa)  LOC7458766 (ppo)  LOC11442626 (mtr)  LOC100259397 (vvi)  LOC100281115 (zma)  NYC1_1 (gma)  NYC1_2 (gma)  LOC101258872 (sly)  LOC103833353 (bra)  LOC103863639 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001190716.1)
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_567400.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001190716.1)
other 4,  mito 3  (predict for NP_567400.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00010 Glycolysis / Gluconeogenesis 2
ath01230 Biosynthesis of amino acids 2
ath00860 Porphyrin and chlorophyll metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
Genes directly connected with NYC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 ABCI8 ATP binding cassette protein 1 [detail] 825814
8.5 ENH1 rubredoxin family protein [detail] 831581
8.0 FTRA2 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 [detail] 830739
7.5 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 822266
6.4 CAT1 catalase 1 [detail] 838652
6.1 PEX11D peroxin 11D [detail] 819182
Coexpressed
gene list		 [Coexpressed gene list for NYC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254764_at
254764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254764_at
254764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254764_at
254764_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826942      
Refseq ID (protein) NP_001190716.1 
NP_567400.1 


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