ATTED-II : GeneID search result

[←][→] ath AT4G13650 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0009451 [list] [network] RNA modification

(403 genes)

IBA

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

ISM

GO MF

GO:0008270 [list] [network] zinc ion binding

(554 genes)

IEA

KEGG

Protein

NP_193101.2

BLAST

NP_193101.2

Orthologous

[Ortholog page] LOC4352470 (osa) LOC7482355 (ppo) LOC25495868 (mtr) LOC100246875 (vvi) LOC100274763 (zma) LOC100776269 (gma) LOC100788946 (gma) LOC101266794 (sly) LOC103646503 (zma) LOC103863614 (bra) LOC109943998 (zma)

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1

(predict for NP_193101.2)

Subcellular
localization
TargetP

other 2

(predict for NP_193101.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G13650 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.3	AT4G39530	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	830107
7.8	SLO2	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	815845
7.8	AT5G52850	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	835362
7.4	OTP85	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	814827
7.1	AT2G36980	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	818272

Coexpressed
gene list

[Coexpressed gene list for AT4G13650]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254725_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254725_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254725_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	826999
Refseq ID (protein)	NP_193101.2

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