ATTED-II : GeneID search result

[←][→] ath AT4G13800 Gene

functional annotation

Function

magnesium transporter NIPA (DUF803)

GO BP

GO:0015693 [list] [network] magnesium ion transport

(17 genes)

IBA

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

GO:0015095 [list] [network] magnesium ion transmembrane transporter activity

(19 genes)

IEA

KEGG

Protein

NP_001319923.1 NP_001327950.1 NP_001327951.1 NP_001327952.1 NP_001327953.1 NP_001327954.1 NP_001327955.1 NP_001327956.1 NP_001327957.1 NP_567411.1

BLAST

NP_001319923.1 NP_001327950.1 NP_001327951.1 NP_001327952.1 NP_001327953.1 NP_001327954.1 NP_001327955.1 NP_001327956.1 NP_001327957.1 NP_567411.1

Orthologous

[Ortholog page] AT3G23870 (ath) AT4G09640 (ath) AT1G34470 (ath) AT1G71900 (ath) LOC4324996 (osa) LOC4335601 (osa) LOC4338847 (osa) LOC4349995 (osa) LOC11420627 (mtr) LOC11443042 (mtr) LOC25501794 (mtr) LOC100217146 (zma) LOC100250963 (vvi) LOC100262398 (vvi) LOC100274084 (zma) LOC100274489 (zma) LOC100283647 (zma) LOC100381821 (zma) LOC100382015 (zma) LOC100501448 (zma) LOC100785617 (gma) LOC100786949 (gma) LOC100804175 (gma) LOC100820218 (gma) LOC101244616 (sly) LOC101246186 (sly) LOC101260323 (sly) LOC101261668 (sly) LOC103828696 (bra) LOC103831704 (bra) LOC103852735 (bra) LOC103860011 (bra) LOC103863595 (bra)

Subcellular
localization
wolf

vacu 4, cyto 2, E.R._vacu 2, plas 1, cysk 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_001319923.1)
vacu 4, plas 3, cyto 1, cysk 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001327950.1)
vacu 4, cyto 2, E.R._vacu 2, plas 1, cysk 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_001327951.1)
vacu 4, cyto 2, E.R._vacu 2, plas 1, cysk 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_001327952.1)
vacu 4, plas 3, cyto 1, cysk 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001327953.1)
vacu 4, plas 3, cyto 1, cysk 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001327954.1)
vacu 4, plas 3, cyto 2, E.R._vacu 2	(predict for NP_001327955.1)
vacu 4, plas 3, cyto 1, cysk 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001327956.1)
vacu 4, plas 3, cyto 2, E.R._vacu 2	(predict for NP_001327957.1)
vacu 4, cyto 2, E.R._vacu 2, plas 1, cysk 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_567411.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001319923.1)
other 8	(predict for NP_001327950.1)
other 8	(predict for NP_001327951.1)
other 8	(predict for NP_001327952.1)
other 8	(predict for NP_001327953.1)
other 8	(predict for NP_001327954.1)
other 8	(predict for NP_001327955.1)
other 8	(predict for NP_001327956.1)
other 8	(predict for NP_001327957.1)
other 8	(predict for NP_567411.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G13800 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.0	AT5G02180	Transmembrane amino acid transporter family protein	[detail]	831862
5.1	AT3G24460	Serinc-domain containing serine and sphingolipid biosynthesis protein	[detail]	822036
4.6	GPX7	glutathione peroxidase 7	[detail]	829316

Coexpressed
gene list

[Coexpressed gene list for AT4G13800]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254683_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254683_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254683_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827014
Refseq ID (protein)	NP_001319923.1
	NP_001327950.1
	NP_001327951.1
	NP_001327952.1
	NP_001327953.1
	NP_001327954.1
	NP_001327955.1
	NP_001327956.1
	NP_001327957.1
	NP_567411.1

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