[←][→] ath   AT4G13860 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IBA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA  
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_001329851.1  NP_193122.2 
BLAST NP_001329851.1  NP_193122.2 
Orthologous [Ortholog page] GRP4 (ath)  GR-RBP2 (ath)  GR-RBP3 (ath)  GR-RBP5 (ath)  LOC4324334 (osa)  LOC4343831 (osa)  LOC4348309 (osa)  LOC4352279 (osa)  LOC7487102 (ppo)  LOC7495840 (ppo)  LOC11434380 (mtr)  LOC11436305 (mtr)  LOC25493886 (mtr)  LOC25497513 (mtr)  LOC25497514 (mtr)  LOC100191295 (zma)  LOC100247038 (vvi)  LOC100256940 (vvi)  LOC100283778 (zma)  LOC100284207 (zma)  LOC100499841 (gma)  LOC100527220 (gma)  LOC100782808 (gma)  LOC100799124 (gma)  LOC100807155 (gma)  LOC100818300 (gma)  LOC101247067 (sly)  ORRM4 (sly)  LOC101254436 (sly)  LOC101257264 (sly)  LOC101261381 (sly)  LOC103831896 (bra)  LOC103833149 (bra)  LOC103833150 (bra)  LOC103837367 (bra)  LOC103852765 (bra)  LOC103852896 (bra)  LOC103860567 (bra)  LOC103868326 (bra) 
Subcellular
localization
wolf
cyto 5,  extr 4  (predict for NP_001329851.1)
cyto 9  (predict for NP_193122.2)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001329851.1)
other 7  (predict for NP_193122.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G13860 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 AT1G06640 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 837173
3.8 CYP81F4 cytochrome P450, family 81, subfamily F, polypeptide 4 [detail] 829895
3.7 AT5G23840 MD-2-related lipid recognition domain-containing protein [detail] 832449
Coexpressed
gene list		 [Coexpressed gene list for AT4G13860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254738_at
254738_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254738_at
254738_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254738_at
254738_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827020      
Refseq ID (protein) NP_001329851.1 
NP_193122.2 


The preparation time of this page was 0.1 [sec].