[←][→] ath   AT4G14050 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (21 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001329428.1  NP_193141.2 
BLAST NP_001329428.1  NP_193141.2 
Orthologous [Ortholog page] LOC4351063 (osa)  LOC7495830 (ppo)  LOC11432733 (mtr)  LOC100249938 (vvi)  LOC100782048 (gma)  LOC101250161 (sly)  LOC103630373 (zma)  LOC103833779 (bra) 
Subcellular
localization
wolf
chlo 7,  mito 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001329428.1)
plas 6,  E.R. 4  (predict for NP_193141.2)
Subcellular
localization
TargetP
chlo 4,  scret 3  (predict for NP_001329428.1)
mito 8,  other 4  (predict for NP_193141.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G14050 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842125
8.7 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837439
8.5 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817933
Coexpressed
gene list		 [Coexpressed gene list for AT4G14050]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245620_at
245620_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245620_at
245620_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245620_at
245620_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827041      
Refseq ID (protein) NP_001329428.1 
NP_193141.2 


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