[←][→] ath   AT4G15093 Gene
functional annotation
Function   catalytic LigB subunit of aromatic ring-opening dioxygenase family  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO:0006725 [list] [network] cellular aromatic compound metabolic process  (2480 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008198 [list] [network] ferrous iron binding  (15 genes)  IEA  
GO:0016701 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen  (38 genes)  IEA  
GO:0051213 [list] [network] dioxygenase activity  (147 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG ath00965 [list] [network] Betalain biosynthesis (2 genes)
Protein NP_567456.1 
BLAST NP_567456.1 
Orthologous [Ortholog page] LOC4324833 (osa)  LOC4325095 (osa)  LOC7463018 (ppo)  LOC7463019 (ppo)  LOC11420281 (mtr)  LOC25484511 (mtr)  LOC100244355 (vvi)  LOC100262346 (vvi)  pco060792 (zma)  LOC100797161 (gma)  LOC100798236 (gma)  LOC100810694 (gma)  LOC101252146 (sly)  LOC101255627 (sly)  LOC103650928 (zma)  LOC103833499 (bra)  LOC103871325 (bra)  LOC103871335 (bra) 
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  extr 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_567456.1)
Subcellular
localization
TargetP
other 7  (predict for NP_567456.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
Genes directly connected with LigB on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family protein [detail] 842627
5.2 AT1G35190 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 840408
5.0 AT2G46140 Late embryogenesis abundant protein [detail] 819221
Coexpressed
gene list		 [Coexpressed gene list for LigB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245292_at
245292_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245292_at
245292_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245292_at
245292_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827174      
Refseq ID (protein) NP_567456.1 


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